diff --git a/pkNX.Containers/VFS/FileSystems/Archives/ZipArchiveFileSystem.cs b/pkNX.Containers/VFS/FileSystems/Archives/ZipArchiveFileSystem.cs
index 1f251b67..a47ba688 100644
--- a/pkNX.Containers/VFS/FileSystems/Archives/ZipArchiveFileSystem.cs
+++ b/pkNX.Containers/VFS/FileSystems/Archives/ZipArchiveFileSystem.cs
@@ -126,7 +126,7 @@ public void CreateDirectory(FileSystemPath path)
         ZipArchive.CreateEntry(ToEntryPath(path));
     }
 
-    public void Delete(FileSystemPath path)
+    public void Delete(FileSystemPath path, DeleteMode mode = DeleteMode.TopMostLayer)
     {
         ZipArchiveEntry? entry = ZipArchive.GetEntry(ToEntryPath(path));
         entry?.Delete();
diff --git a/pkNX.Containers/VFS/FileSystems/IFileSystem.cs b/pkNX.Containers/VFS/FileSystems/IFileSystem.cs
index 1298549a..9d8a98e7 100644
--- a/pkNX.Containers/VFS/FileSystems/IFileSystem.cs
+++ b/pkNX.Containers/VFS/FileSystems/IFileSystem.cs
@@ -5,6 +5,14 @@
 
 namespace pkNX.Containers.VFS;
 
+public enum DeleteMode
+{
+    TopMostLayer,
+    TopMostWriteableLayer,
+    AllWritable,
+    All
+}
+
 public interface IFileSystem : IDisposable
 {
     bool IsReadOnly => false;
@@ -53,7 +61,8 @@ public interface IFileSystem : IDisposable
     /// Deletes the specified file or directory. Does not throw an exception if the specified file or directory does not exist.
     /// </summary>
     /// <param name="path">The path and name of the file or directory to delete.</param>
-    void Delete(FileSystemPath path);
+    /// <param name="mode">The method to use when deleting the file or directory.</param>
+    void Delete(FileSystemPath path, DeleteMode mode = DeleteMode.TopMostLayer);
 
     public void Move(FileSystemPath sourcePath, IFileSystem destinationFileSystem, FileSystemPath destinationPath)
     {
diff --git a/pkNX.Containers/VFS/FileSystems/LayeredFileSystem.cs b/pkNX.Containers/VFS/FileSystems/LayeredFileSystem.cs
index 028b74a2..139d58b3 100644
--- a/pkNX.Containers/VFS/FileSystems/LayeredFileSystem.cs
+++ b/pkNX.Containers/VFS/FileSystems/LayeredFileSystem.cs
@@ -212,9 +212,26 @@ public void CreateDirectory(FileSystemPath path)
         fs.CreateDirectory(path);
     }
 
-    public void Delete(FileSystemPath path)
+    public void Delete(FileSystemPath path, DeleteMode mode = DeleteMode.TopMostLayer)
     {
-        foreach (var fs in FileSystems.Where(fs => fs.Exists(path)))
-            fs.Delete(path);
+        switch (mode)
+        {
+            case DeleteMode.TopMostLayer:
+                GetFirstWhereExists(path)?.Delete(path);
+                break;
+            case DeleteMode.TopMostWriteableLayer:
+                GetFirstWritableWhereExists(path)?.Delete(path);
+                break;
+            case DeleteMode.AllWritable:
+                foreach (var fs in FileSystems.Where(fs => !fs.IsReadOnly && fs.Exists(path)))
+                    fs.Delete(path);
+                break;
+            case DeleteMode.All:
+                foreach (var fs in FileSystems.Where(fs => fs.Exists(path)))
+                    fs.Delete(path);
+                break;
+            default:
+                throw new ArgumentOutOfRangeException(nameof(mode), mode, null);
+        }
     }
 }
diff --git a/pkNX.Containers/VFS/FileSystems/PhysicalFileSystem.cs b/pkNX.Containers/VFS/FileSystems/PhysicalFileSystem.cs
index 82841b45..112ac6b8 100644
--- a/pkNX.Containers/VFS/FileSystems/PhysicalFileSystem.cs
+++ b/pkNX.Containers/VFS/FileSystems/PhysicalFileSystem.cs
@@ -102,7 +102,7 @@ public void CreateDirectory(FileSystemPath path)
         Directory.CreateDirectory(GetPhysicalPath(path));
     }
 
-    public void Delete(FileSystemPath path)
+    public void Delete(FileSystemPath path, DeleteMode mode = DeleteMode.TopMostLayer)
     {
         if (path.IsFile)
             File.Delete(GetPhysicalPath(path));
diff --git a/pkNX.Containers/VFS/FileSystems/ReadOnlyFileSystem.cs b/pkNX.Containers/VFS/FileSystems/ReadOnlyFileSystem.cs
index d5f4f28b..d3328aa7 100644
--- a/pkNX.Containers/VFS/FileSystems/ReadOnlyFileSystem.cs
+++ b/pkNX.Containers/VFS/FileSystems/ReadOnlyFileSystem.cs
@@ -67,7 +67,7 @@ public void CreateDirectory(FileSystemPath path)
     }
 
     [MethodImpl(MethodImplOptions.AggressiveInlining)]
-    public void Delete(FileSystemPath path)
+    public void Delete(FileSystemPath path, DeleteMode mode = DeleteMode.TopMostLayer)
     {
         throw new UnauthorizedAccessException("This is a read-only filesystem.");
     }
diff --git a/pkNX.Containers/VFS/FileSystems/RelativeFileSystem.cs b/pkNX.Containers/VFS/FileSystems/RelativeFileSystem.cs
index afa26a2d..34d585a6 100644
--- a/pkNX.Containers/VFS/FileSystems/RelativeFileSystem.cs
+++ b/pkNX.Containers/VFS/FileSystems/RelativeFileSystem.cs
@@ -76,8 +76,8 @@ public void CreateDirectory(FileSystemPath path)
     }
 
     [MethodImpl(MethodImplOptions.AggressiveInlining)]
-    public void Delete(FileSystemPath path)
+    public void Delete(FileSystemPath path, DeleteMode mode = DeleteMode.TopMostLayer)
     {
-        FileSystem.Delete(ToAbsolutePath(path));
+        FileSystem.Delete(ToAbsolutePath(path), mode);
     }
 }
diff --git a/pkNX.Containers/VFS/Util/IFileSystemEntity.cs b/pkNX.Containers/VFS/Util/IFileSystemEntity.cs
index 9c9ed6c9..c70f2393 100644
--- a/pkNX.Containers/VFS/Util/IFileSystemEntity.cs
+++ b/pkNX.Containers/VFS/Util/IFileSystemEntity.cs
@@ -17,9 +17,9 @@ public void MoveTo(IFileSystem destinationFileSystem, FileSystemPath destination
         FileSystem.Move(Path, destinationFileSystem, destinationPath);
     }
 
-    public void Delete()
+    public void Delete(DeleteMode mode = DeleteMode.TopMostLayer)
     {
-        FileSystem.Delete(Path);
+        FileSystem.Delete(Path, mode);
     }
 
     public void Exists()
diff --git a/pkNX.Containers/VFS/Util/VirtualDirectory.cs b/pkNX.Containers/VFS/Util/VirtualDirectory.cs
index 4f80f5c8..2f95679f 100644
--- a/pkNX.Containers/VFS/Util/VirtualDirectory.cs
+++ b/pkNX.Containers/VFS/Util/VirtualDirectory.cs
@@ -18,6 +18,11 @@ public void MoveTo(VirtualDirectory destination)
         FileSystem.Move(Path, destination.FileSystem, destination.Path.AppendDirectory(Name));
     }
 
+    public void Delete(DeleteMode mode = DeleteMode.TopMostLayer)
+    {
+        FileSystem.Delete(Path, mode);
+    }
+
     internal static VirtualDirectory Create(IFileSystem fileSystem, FileSystemPath path)
     {
         if (!path.IsDirectory)
diff --git a/pkNX.Containers/VFS/Util/VirtualFile.cs b/pkNX.Containers/VFS/Util/VirtualFile.cs
index 7d0a037e..f3398fff 100644
--- a/pkNX.Containers/VFS/Util/VirtualFile.cs
+++ b/pkNX.Containers/VFS/Util/VirtualFile.cs
@@ -51,6 +51,11 @@ public void MoveTo(VirtualDirectory destination)
         FileSystem.Move(Path, destination.FileSystem, destination.Path.AppendFile(Name));
     }
 
+    public void Delete(DeleteMode mode = DeleteMode.TopMostLayer)
+    {
+        FileSystem.Delete(Path, mode);
+    }
+
     public ReadOnlySpan<byte> ReadAllBytes()
     {
         using var stream = Open();
diff --git a/pkNX.Containers/VFS/VirtualFileSystem.cs b/pkNX.Containers/VFS/VirtualFileSystem.cs
index 4765d8fa..4c8b8e35 100644
--- a/pkNX.Containers/VFS/VirtualFileSystem.cs
+++ b/pkNX.Containers/VFS/VirtualFileSystem.cs
@@ -107,9 +107,9 @@ public void CreateDirectory(FileSystemPath path)
     }
 
     [MethodImpl(MethodImplOptions.AggressiveInlining)]
-    public void Delete(FileSystemPath path)
+    public void Delete(FileSystemPath path, DeleteMode mode = DeleteMode.TopMostLayer)
     {
         var mount = GetMountPoint(path);
-        mount.FileSystem.Delete(path);
+        mount.FileSystem.Delete(path, mode);
     }
 }